Chapter 14 Reproducibility
Version 1.5 Mar 1, 2021 Reorganized and expanded the effect size chapter.
Reworked the sequence of ggplot graphs in the EDA section.
Updated some syntax styles and improved some wording/layout.
Corrected too many typos.
Version 1.4 Oct 16, 2020
Added a chapter on unequal sample size implications.
Updated some syntax styles and improved some wording.
Version 1.3 Oct 13, 2020
updated some syntax styles and emphasized using summary.lm on `aov` objects
Cleaned up some wording and layout issues.Version 1.2 Sept. 16, 2020
updated for some R version 4 compatibility issues, including stringsAsFactors in read.csv.
Also edited some wording.
Version 1.1 April 9, 2020
converted to bookdown format, added multiple sections:
new graphs, contrast analysis details, nonparametrics, permutation, bootstrapping, etc.
Version 1.0 Feb 25, 2019
sessionInfo()## R version 4.0.3 (2020-10-10)
## Platform: x86_64-w64-mingw32/x64 (64-bit)
## Running under: Windows 10 x64 (build 18363)
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## Matrix products: default
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## locale:
## [1] LC_COLLATE=English_United States.1252
## [2] LC_CTYPE=English_United States.1252
## [3] LC_MONETARY=English_United States.1252
## [4] LC_NUMERIC=C
## [5] LC_TIME=English_United States.1252
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## attached base packages:
## [1] parallel tcltk stats graphics grDevices utils datasets
## [8] methods base
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## other attached packages:
## [1] dplyr_1.0.4 WRS2_1.1-1
## [3] userfriendlyscience_0.7.2 sjstats_0.18.1
## [5] sciplot_1.2-0 Rmisc_1.5
## [7] rcompanion_2.3.27 pwr_1.3-0
## [9] psych_2.0.12 plyr_1.8.6
## [11] plotrix_3.8-1 pgirmess_1.6.9
## [13] outliers_0.14 nortest_1.0-4
## [15] mutoss_0.1-12 multtest_2.44.0
## [17] Biobase_2.48.0 BiocGenerics_0.34.0
## [19] multcomp_1.4-16 TH.data_1.0-10
## [21] MASS_7.3-53.1 mvtnorm_1.1-1
## [23] lsr_0.5 lmPerm_2.1.0
## [25] lmboot_0.0.1 lawstat_3.4
## [27] lattice_0.20-41 knitr_1.31
## [29] KScorrect_1.4.0 gt_0.2.2
## [31] gridExtra_2.3 granova_2.1
## [33] ggstatsplot_0.7.0 ggthemes_4.2.4
## [35] ggplot2_3.3.3 DTK_3.5
## [37] ez_4.4-0 emmeans_1.5.4
## [39] effectsize_0.4.3 dunn.test_1.3.5
## [41] coin_1.4-1 survival_3.2-7
## [43] car_3.0-10 carData_3.0-4
## [45] beeswarm_0.2.3 BayesFactor_0.9.12-4.2
## [47] coda_0.19-4 asbio_1.6-7
## [49] afex_0.28-1 lme4_1.1-26
## [51] Matrix_1.3-2
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## loaded via a namespace (and not attached):
## [1] estimability_1.3 GGally_2.1.0
## [3] lavaan_0.6-7 tidyr_1.1.2
## [5] data.table_1.13.6 doParallel_1.0.16
## [7] generics_0.1.0 combinat_0.0-8
## [9] DiagrammeR_1.0.6.1 correlation_0.6.0
## [11] httpuv_1.5.5 assertthat_0.2.1
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## [15] hms_1.0.0 data.tree_1.0.0
## [17] evaluate_0.14 promises_1.2.0.1
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## [21] DBI_1.1.1 tmvnsim_1.0-2
## [23] pixmap_0.4-12 reshape_0.8.8
## [25] kSamples_1.2-9 stats4_4.0.3
## [27] Rmpfr_0.8-2 paletteer_1.3.0
## [29] spdep_1.1-5 purrr_0.3.4
## [31] ellipsis_0.3.1 backports_1.2.1
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## [35] insight_0.13.0 prismatic_1.0.0
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